Human Podocalyxin Antibody Summary
Ser23-Arg427
Accession # AAB61574
Applications
Please Note: Optimal dilutions should be determined by each laboratory for each application. General Protocols are available in the Technical Information section on our website.
Scientific Data
Detection of Human Podocalyxin by Western Blot. Western blot shows lysates of human kidney tissue. PVDF membrane was probed with 1 µg/mL of Goat Anti-Human Podocalyxin Antigen Affinity-purified Polyclonal Antibody (Catalog # AF1658) followed by HRP-conjugated Anti-Goat IgG Secondary Antibody (Catalog # HAF109). A specific band was detected for Podocalyxin at approximately 130 kDa (as indicated). This experiment was conducted under reducing conditions and using Immunoblot Buffer Group 1.
Podocalyxin in Human Kidney. Podocalyxin was detected in immersion fixed paraffin-embedded sections of human kidney using 5 µg/mL Goat Anti-Human Podocalyxin Antigen Affinity-purified Polyclonal Antibody (Catalog # AF1658) overnight at 4 °C. Tissue was stained with the Anti-Goat HRP-DAB Cell & Tissue Staining Kit (brown; Catalog # CTS008) and counterstained with hematoxylin (blue). Specific labeling was localized to podocytes in glomeruli. View our protocol for Chromogenic IHC Staining of Paraffin-embedded Tissue Sections.
Western Blot Shows Human Podocalyxin Specificity by Using Knockout Cell Line. Western blot shows lysates of HeLa human cervical epithelial carcinoma parental cell line and Podocalyxin/PODXL knockout HeLa cell line (KO). PVDF membrane was probed with 1 µg/mL of Goat Anti-Human Podocalyxin Antigen Affinity-purified Polyclonal Antibody (Catalog # AF1658) followed by HRP-conjugated Anti-Goat IgG Secondary Antibody (Catalog # HAF017). A specific band was detected for Podocalyxin at approximately 160 kDa (as indicated) in the parental HeLa cell line, but is not detectable in knockout HeLa cell line. GAPDH (Catalog # AF5718) is shown as a loading control. This experiment was conducted under reducing conditions and using Immunoblot Buffer Group 1.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence Podocalyxin promotes lumenogenesis in epiblast spheroids.(a) Immunoblot for podocalyxin protein in two representative PODXL−/− hPSC mutant clones (m1 and m2), compared with CRISPR/Cas9 non-mutant wild-type clones (WT) or cells subjected to scrambled (scr) or podocalyxin (pod) siRNA knockdown. (b) Brightfield images of sandwiched parental ESCs were compared with two mutant or two WT CRISPR/Cas9 clones. (c) Cavitated spheroids as a percentage of total colonies. Data from pools of WT or mutant cell lines were averaged to determine group means (AVG, n≥9) and P values. (d) Podocalyxin and ZO-1 immunofluorescence in naive and primed hLR5 hPSCs or (e) mESCs and EpiSCs. (f) Confocal z-sections of undifferentiated hPSCs showing localization of ZO-1 and beta CAT in unmodified (WT) or PODXL−/− colonies. (g) Filamentous actin (f-actin) and occludin (OCLN) immunofluorescence in undifferentiated WT or PODXL−/− clones. (h) Averaged TEER measurements in WT or PODXL−/− monolayers (n≥3). Scale bars, 50 μm or (f,g) 20 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence Podocalyxin promotes lumenogenesis in epiblast spheroids.(a) Immunoblot for podocalyxin protein in two representative PODXL−/− hPSC mutant clones (m1 and m2), compared with CRISPR/Cas9 non-mutant wild-type clones (WT) or cells subjected to scrambled (scr) or podocalyxin (pod) siRNA knockdown. (b) Brightfield images of sandwiched parental ESCs were compared with two mutant or two WT CRISPR/Cas9 clones. (c) Cavitated spheroids as a percentage of total colonies. Data from pools of WT or mutant cell lines were averaged to determine group means (AVG, n≥9) and P values. (d) Podocalyxin and ZO-1 immunofluorescence in naive and primed hLR5 hPSCs or (e) mESCs and EpiSCs. (f) Confocal z-sections of undifferentiated hPSCs showing localization of ZO-1 and beta CAT in unmodified (WT) or PODXL−/− colonies. (g) Filamentous actin (f-actin) and occludin (OCLN) immunofluorescence in undifferentiated WT or PODXL−/− clones. (h) Averaged TEER measurements in WT or PODXL−/− monolayers (n≥3). Scale bars, 50 μm or (f,g) 20 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence Junctional complexes are disrupted in hPSC-derived PODXL−/− podocyte-like cells.(a) Confocal optical section of adult human kidney. Podocalyxin is expressed in podocytes and peritubular capillaries, but is absent from tubules (white dotted lines). Auto, autofluorescence. (b) Crumbs3 expression in hPSC-derived kidney organoids (confocal red channel) and human kidney tissue (far right panel, immunohistochemistry). (c) Confocal optical sections showing distributions of ZO-1 with podocalyxin or (d) beta CAT in hPSC-derived podocyte-like cell clusters. Arrowheads highlight tracks of junctional complexes between podocyte-like cells. (e) Confocal sections of wild-type or PODXL−/− podocyte-like cell clusters in tubular organoids. (f) Gap widths between adjacent podocyte-like cell nuclei in these cell lines (n≥100 gaps pooled from two experiments). Scale bars, 50 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence Junctional complexes are disrupted in hPSC-derived PODXL−/− podocyte-like cells.(a) Confocal optical section of adult human kidney. Podocalyxin is expressed in podocytes and peritubular capillaries, but is absent from tubules (white dotted lines). Auto, autofluorescence. (b) Crumbs3 expression in hPSC-derived kidney organoids (confocal red channel) and human kidney tissue (far right panel, immunohistochemistry). (c) Confocal optical sections showing distributions of ZO-1 with podocalyxin or (d) beta CAT in hPSC-derived podocyte-like cell clusters. Arrowheads highlight tracks of junctional complexes between podocyte-like cells. (e) Confocal sections of wild-type or PODXL−/− podocyte-like cell clusters in tubular organoids. (f) Gap widths between adjacent podocyte-like cell nuclei in these cell lines (n≥100 gaps pooled from two experiments). Scale bars, 50 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence hPSCs form cavitated spheroids in 3D culture.(a) Schematic of spheroid-to-organoid culture protocol. (b) Phase contrast images of ESCs in sandwich (3D) or monolayer (2D) cultures. Consecutive days are shown, with d0 indicating the time point immediately before sandwiching. (c) Confocal optical sections showing PODXL, ZO-1 and beta CAT immunofluorescence through a representative spheroid with cavity. Vertical distance from top to bottom row is shown at left. (d) Representative brightfield images of hPSCs in 3D cultures that were dissociated (coloured frames) and passaged (matching coloured arrows). Dashed arrows represent serial passages in the 3D condition. Lower row shows cells plated into 2D cultures from dissociated spheroids from each passage. (e) Hematoxylin and eosin-stained sections of teratomas generated from hPSC serial 3D passages p3, p6 and p9 showing pigmented epithelium (ectoderm), cartilage (mesoderm) and glandular epithelium (endoderm). (f) Cell number (average of duplicate counts for each time point, or AVG of all five time points shown in the last column) in 2D and 3D cultures 72 h after plating. (g) Representative immunofluorescence images showing OCT4 and sex-determining region Y box-2 (SOX2) or tumor rejection antigen 1–60 (TRA-1-60) and NANOG localization in p3 and p7 serially sandwiched hPSCs. Scale bars, 100 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human Podocalyxin Like by Immunocytochemistry/Immunofluorescence Junctional complexes are disrupted in hPSC-derived PODXL−/− podocyte-like cells.(a) Confocal optical section of adult human kidney. Podocalyxin is expressed in podocytes and peritubular capillaries, but is absent from tubules (white dotted lines). Auto, autofluorescence. (b) Crumbs3 expression in hPSC-derived kidney organoids (confocal red channel) and human kidney tissue (far right panel, immunohistochemistry). (c) Confocal optical sections showing distributions of ZO-1 with podocalyxin or (d) beta CAT in hPSC-derived podocyte-like cell clusters. Arrowheads highlight tracks of junctional complexes between podocyte-like cells. (e) Confocal sections of wild-type or PODXL−/− podocyte-like cell clusters in tubular organoids. (f) Gap widths between adjacent podocyte-like cell nuclei in these cell lines (n≥100 gaps pooled from two experiments). Scale bars, 50 μm. Error bars, s.e.m. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/26493500), licensed under a CC-BY license. Not internally tested by R&D Systems.
Reconstitution Calculator
Preparation and Storage
- 12 months from date of receipt, -20 to -70 °C as supplied.
- 1 month, 2 to 8 °C under sterile conditions after reconstitution.
- 6 months, -20 to -70 °C under sterile conditions after reconstitution.
Background: Podocalyxin
Podocalyxin, also known as Podocalyxin-like protein-1 (PCLP1 or PODXL), is a type I transmembrane glycoprotein. It belongs to the CD34/Podocalyxin family of sialomucins that share structural similarity and sequence homology. Podocalyxin is a major sialoprotein in the podocytes of the kidney glomerulus and is also expressed by both endothelium and multipotent hematopoietic progenitors. It has been identified as a novel cell surface marker for hemangioblasts, the common precursors of hematopoietic and endothelial cells (1, 2).
Product Datasheets
Citations for Human Podocalyxin Antibody
R&D Systems personnel manually curate a database that contains references using R&D Systems products. The data collected includes not only links to publications in PubMed, but also provides information about sample types, species, and experimental conditions.
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Citations: Showing 1 - 10
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VE-cadherin interacts with cell polarity protein Pals1 to regulate vascular lumen formation
Mol Biol Cell, 2016-07-27;0(0):.
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Generation of Human PSC-Derived Kidney Organoids with Patterned Nephron Segments and a De Novo Vascular Network
Authors: JH Low, P Li, EGY Chew, B Zhou, K Suzuki, T Zhang, MM Lian, M Liu, E Aizawa, C Rodriguez, KSM Yong, Q Chen, JM Campistol, M Fang, CC Khor, JN Foo, JC Izpisua Be, Y Xia
Cell Stem Cell, 2019-07-11;0(0):.
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A Versatile Polypharmacology Platform Promotes Cytoprotection and Viability of Human Pluripotent and Differentiated Cells
Authors: Chen Y, Tristan CA, Lu C et al.
Nat Methods
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Integrated single-cell RNA-seq analysis reveals mitochondrial calcium signaling as a modulator of endothelial-to-mesenchymal transition
Authors: Lebas, M;Chinigò, G;Courmont, E;Bettaieb, L;Machmouchi, A;Goveia, J;Beatovic, A;Van Kerckhove, J;Robil, C;Angulo, FS;Vedelago, M;Errerd, A;Treps, L;Gao, V;Delgado De la Herrán, HC;Mayeuf-Louchart, A;L'homme, L;Chamlali, M;Dejos, C;Gouyer, V;Garikipati, VNS;Tomar, D;Yin, H;Fukui, H;Vinckier, S;Stolte, A;Conradi, LC;Infanti, F;Lemonnier, L;Zeisberg, E;Luo, Y;Lin, L;Desseyn, JL;Pickering, J;Kishore, R;Madesh, M;Dombrowicz, D;Perocchi, F;Staels, B;Pla, AF;Gkika, D;Cantelmo, AR;
Science advances
Species: Human
Sample Types: Whole Cells
Applications: Immunocytochemistry -
Kidney organoid models reveal cilium-autophagy metabolic axis as a therapeutic target for PKD both in vitro and in vivo
Authors: Liu, M;Zhang, C;Gong, X;Zhang, T;Lian, MM;Chew, EGY;Cardilla, A;Suzuki, K;Wang, H;Yuan, Y;Li, Y;Naik, MY;Wang, Y;Zhou, B;Soon, WZ;Aizawa, E;Li, P;Low, JH;Tandiono, M;Montagud, E;Moya-Rull, D;Rodriguez Esteban, C;Luque, Y;Fang, M;Khor, CC;Montserrat, N;Campistol, JM;Izpisua Belmonte, JC;Foo, JN;Xia, Y;
Cell stem cell
Species: Human
Sample Types: Organoid
Applications: Immunohistochemistry -
Efficient and scalable generation of primordial germ cells in 2D culture using basement membrane extract overlay
Authors: Arend W. Overeem, Yolanda W. Chang, Ioannis Moustakas, Celine M. Roelse, Sanne Hillenius, Talia Van Der Helm et al.
Cell Reports Methods
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Scalable projected Light Sheet Microscopy for high-resolution imaging of large samples
Authors: Chen, Y;Gong, C;Chauhan, S;De La Cruz, ED;Datta, MS;Tomer, R;
bioRxiv : the preprint server for biology
Species: Human
Sample Types: Whole Tissue
Applications: Immunohistochemistry -
Organoid-on-a-chip model of human ARPKD reveals mechanosensing pathomechanisms for drug discovery
Authors: K Hiratsuka, T Miyoshi, KT Kroll, NR Gupta, MT Valerius, T Ferrante, M Yamashita, JA Lewis, R Morizane
Science Advances, 2022-09-21;8(38):eabq0866.
Species: Human
Sample Types: Organoids
Applications: IHC -
JAK inhibitor blocks COVID-19-cytokine-induced JAK-STAT-APOL1 signaling in glomerular cells and podocytopathy in human kidney organoids
Authors: SE Nystrom, G Li, S Datta, K Soldano, D Silas, A Weins, G Hall, DB Thomas, OA Olabisi
JCI Insight, 2022-06-08;0(0):.
Species: Human
Sample Types: Organoids
Applications: IHC -
Podocalyxin Expressed in Antigen Presenting Cells Promotes Interaction With T Cells and Alters Centrosome Translocation to the Contact Site
Authors: Laura Amo, Javier Díez-García, Estíbaliz Tamayo-Orbegozo, Natalia Maruri, Susana Larrucea
Frontiers in Immunology
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A single-cell atlas of the normal and malformed human brain vasculature
Authors: Ethan A. Winkler, Chang N. Kim, Jayden M. Ross, Joseph H. Garcia, Eugene Gil, Irene Oh et al.
Science
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Modeling injury and repair in kidney organoids reveals that homologous recombination governs tubular intrinsic repair
Authors: Gupta N, Matsumoto T, Hiratsuka K et al.
Science Translational Medicine
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Cross-validation of SARS-CoV-2 responses in kidney organoids and clinical populations
Authors: L Helms, S Marchiano, IB Stanaway, TY Hsiang, BA Juliar, S Saini, YT Zhao, A Khanna, R Menon, F Alakwaa, C Mikacenic, ED Morrell, MM Wurfel, M Kretzler, JL Harder, CE Murry, J Himmelfarb, H Ruohola-Ba, PK Bhatraju, M Gale, BS Freedman
JCI Insight, 2021-12-22;0(0):.
Species: Human
Sample Types: Organoid
Applications: IHC -
A tissue-bioengineering strategy for modeling rare human kidney diseases in vivo
Authors: JOR Hernandez, X Wang, M Vazquez-Se, M Lopez-Marf, MF Sobral-Rey, A Moran-Horo, M Sundberg, DO Lopez-Cant, CK Probst, GU Ruiz-Espar, K Giannikou, R Abdi, EP Henske, DJ Kwiatkowsk, M Sahin, DR Lemos
Nature Communications, 2021-11-11;12(1):6496.
Species: Human
Sample Types: Organoids
Applications: IHC -
An efficient method to generate kidney organoids at the air-liquid interface
Authors: Ashwani Kumar Gupta, David Z. Ivancic, Bilal A. Naved, Jason A. Wertheim, Leif Oxburgh
Journal of Biological Methods
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Loss of Primary Cilia Protein IFT20 Dysregulates Lymphatic Vessel Patterning in Development and Inflammation
Authors: Delayna Paulson, Rebecca Harms, Cody Ward, Mackenzie Latterell, Gregory J. Pazour, Darci M. Fink
Frontiers in Cell and Developmental Biology
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Epigenetic transcriptional reprogramming by WT1 mediates a repair response during podocyte injury
Authors: S Ettou, YL Jung, T Miyoshi, D Jain, K Hiratsuka, V Schumacher, ME Taglienti, R Morizane, PJ Park, JA Kreidberg
Sci Adv, 2020-07-24;6(30):eabb5460.
Species: Human
Sample Types: Organoid
Applications: IHC -
Asynchronous mixing of kidney progenitor cells potentiates nephrogenesis in organoids.
Authors: Kumar Gupta A, Sarkar P, Wertheim J, Pan X, Carroll T, Oxburgh L
Commun Biol, 2020-05-11;3(1):231.
Species: Mouse
Sample Types: Organoid
Applications: IHC -
Gut Microbiota Modulate CD8�T Cell Responses to Influence Colitis-Associated Tumorigenesis
Authors: AI Yu, L Zhao, KA Eaton, S Ho, J Chen, S Poe, J Becker, A Gonzalez, D McKinstry, M Hasso, J Mendoza-Ca, J Whitfield, C Koumpouras, PD Schloss, EC Martens, GY Chen
Cell Rep, 2020-04-07;31(1):107471.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Perfusion culture maintained with an air-liquid interface to stimulate epithelial cell organization in renal organoids in vitro
Authors: Sachiko Sekiya, Tetsutaro Kikuchi, Tatsuya Shimizu
BMC Biomedical Engineering
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Senescent Kidney Cells in Hypertensive Patients Release Urinary Extracellular Vesicles.
Authors: Santelli A, Sun I, Eirin A, Abumoawad A, Woollard J, Lerman A, Textor S, Puranik A, Lerman L
J Am Heart Assoc, 2019-06-01;8(11):e012584.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
Authors: M Hochane, PR van den Be, X Fan, N Bérenger-C, E Adegeest, M Bialecka, M Nieveen, M Menschaart, SM Chuva de S, S Semrau
PLoS Biol., 2019-02-21;17(2):e3000152.
Species: Human
Sample Types: Whole Tissue
Applications: IHC-P -
Organoid single cell profiling identifies a transcriptional signature of glomerular disease
Authors: JL Harder, R Menon, EA Otto, J Zhou, S Eddy, NL Wys, C O'Connor, J Luo, V Nair, C Cebrian, JR Spence, M Bitzer, OG Troyanskay, JB Hodgin, RC Wiggins, BS Freedman, M Kretzler
JCI Insight, 2019-01-10;4(1):.
Species: Human
Sample Types: Whole Tissue
Applications: IHC-P -
Human Pluripotent Stem Cell-Derived Kidney Model for Nephrotoxicity Studies.
Authors: Bajaj P, Rodrigues A, Steppan C, Engle S, Mathialagan S, Schroeter T
Drug Metab Dispos, 2018-08-31;46(11):1703-1711.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Anti-podocalyxin antibody exerts antitumor effects via antibody-dependent cellular cytotoxicity in mouse xenograft models of oral squamous cell carcinoma
Authors: S Itai, T Ohishi, MK Kaneko, S Yamada, S Abe, T Nakamura, M Yanaka, YW Chang, SI Ohba, Y Nishioka, M Kawada, H Harada, Y Kato
Oncotarget, 2018-04-27;9(32):22480-22497.
Species: Human
Sample Types: Whole Cells
Applications: Flow Cytometry -
Glycome analysis of extracellular vesicles derived from human induced pluripotent stem cells using lectin microarray
Authors: S Saito, K Hiemori, K Kiyoi, H Tateno
Sci Rep, 2018-03-05;8(1):3997.
Species: Human
Sample Types: Protein, Whole Cells
Applications: Flow Cytometry, Western Blot -
Overexpression of preeclampsia induced microRNA-26a-5p leads to proteinuria in zebrafish
Authors: J Müller-Dei, P Schröder, L Beverly-St, R Hiss, J Fiedler, J Nyström, T Thum, H Haller, M Schiffer
Sci Rep, 2018-02-26;8(1):3621.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Loss of podocalyxin causes a novel syndromic type of congenital nephrotic syndrome
Authors: HG Kang, M Lee, KB Lee, M Hughes, BS Kwon, S Lee, KM McNagny, YH Ahn, JM Ko, IS Ha, M Choi, HI Cheong
Exp. Mol. Med., 2017-12-15;49(12):e414.
Species: Human
Sample Types: Whole Tissue
Applications: IHC -
PAX2 is dispensable for in vitro nephron formation from human induced pluripotent stem cells
Authors: Yusuke Kaku, Atsuhiro Taguchi, Shunsuke Tanigawa, Fahim Haque, Tetsushi Sakuma, Takashi Yamamoto et al.
Scientific Reports
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Lymphatic endothelial progenitors originate from plastic myeloid cells activated by toll-like receptor-4
Authors: LD Volk-Drape, KL Hall, AC Wilber, S Ran
PLoS ONE, 2017-06-09;12(6):e0179257.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of nephron progenitor cells and kidney organoids from human pluripotent stem cells
Nat Protoc, 2016-12-22;12(1):195-207.
Species: Human
Sample Types: Whole Tissue
Applications: IHC -
?-Catenin Is Required for Endothelial Cyp1b1 Regulation Influencing Metabolic Barrier Function
J Neurosci, 2016-08-24;36(34):8921-35.
Species: Mouse
Sample Types: Whole Cells, Whole Tissue
Applications: IHC-Fr, IHC-P -
A Rac/Cdc42 exchange factor complex promotes formation of lateral filopodia and blood vessel lumen morphogenesis
Authors: Sabu Abraham, Margherita Scarcia, Richard D. Bagshaw, Kathryn McMahon, Gary Grant, Tracey Harvey et al.
Nature Communications
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Reversible commitment to differentiation by human multipotent stromal cells in single-cell-derived colonies.
Authors: Ylostalo J, Bazhanov N, Prockop DJ
Exp. Hematol., 2008-07-10;36(10):1390-402.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Modeling of Fabry disease nephropathy using patient derived human induced pluripotent stem cells and kidney organoid system
Authors: S Cui, X Fang, H Lee, YJ Shin, ES Koh, S Chung, HS Park, SW Lim, KI Lee, JY Lee, CW Yang, BH Chung
Journal of Translational Medicine, 2023-02-22;21(1):138.
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Human Induced Pluripotent Stem Cell-Derived Podocytes Mature into Vascularized Glomeruli upon Experimental Transplantation.
Authors: Sharmin S, Taguchi A, Kaku Y et al.
J. Am. Soc. Nephrol.
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