Human/Mouse/Rat SOX1 Antibody Summary
Asn242-Gly379 (Leu276Ile)
Accession # NP_005977
Applications
Please Note: Optimal dilutions should be determined by each laboratory for each application. General Protocols are available in the Technical Information section on our website.
Scientific Data
Detection of Human SOX1 by Western Blot. Western blot shows lysates of undifferentiated iBJ6 human iPS cells and iBJ6 human iPS cells differentiated into neuroprogenitor cells. PVDF membrane was probed with 1 µg/mL of Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) followed by HRP-conjugated Anti-Goat IgG Secondary Antibody (HAF017). A specific band was detected for SOX1 at approximately 39 kDa (as indicated). This experiment was conducted under reducing conditions and using Immunoblot Buffer Group 1.
SOX1 in ectoderm differentuiated BG01V Human Embryonic Stem Cells. SOX1 was detected in immersion fixed BG01V human embryonic stem cells differentiated into neural progenitor cells using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 10 µg/mL for 3 hours at room temperature. Cells were stained using the NorthernLights™ 557-conjugated Anti-Goat IgG Secondary Antibody (red; NL001) and counterstained with DAPI (blue). Nestin was also detected using Mouse Anti-Mouse/Rat Nestin Monoclonal Antibody (MAB2736) and stained using the NorthernLights™ 493-conjugated Anti-Mouse IgG Secondary Antibody (green; Catalog # NL009). Specific staining of SOX1 was localized to nuclei. View our protocol for Fluorescent ICC Staining of Stem Cells on Coverslips.
SOX1 in differentiated NTera‑2 Human Cell Line. SOX1 was detected in immersion fixed NTera-2 human testicular embryonic carcinoma cell line differentiated with retinoic acid using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 10 µg/mL for 3 hours at room temperature. Cells were stained using the NorthernLights™ 493-conjugated Anti-Goat IgG Secondary Antibody (green, upper panel; NL003) and counterstained with DAPI (blue, lower panel). View our protocol for Fluorescent ICC Staining of Cells on Coverslips.
SOX1 in Rat Cortical Stem Cells. SOX1 was detected in immersion fixed rat cortical stem cells (NSC001) using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 10 µg/mL for 3 hours at room temperature. Cells were stained using the NorthernLights™ 557-conjugated Anti-Goat IgG Secondary Antibody (red, upper panel; NL001) and counterstained with DAPI (blue, lower panel). Specific staining was localized to nuclei. View our protocol for Fluorescent ICC Staining of Cells on Coverslips.
SOX1 in Mouse Cortical Stem Cells. SOX1 was detected in immersion fixed mouse cortical stem cells (Catalog # NSC002) using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 10 µg/mL for 3 hours at room temperature. Cells were stained using the NorthernLights™ 557-conjugated Anti-Goat IgG Secondary Antibody (red, upper panel; NL001) and counterstained with DAPI (blue, lower panel). Specific staining was localized to nuclei. View our protocol for Fluorescent ICC Staining of Cells on Coverslips.
SOX1 in Human Brain (Cortex). SOX1 was detected in immersion fixed paraffin-embedded sections of human brain (cortex) using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 3 µg/mL for 1 hour at room temperature followed by incubation with the Anti-Mouse IgG VisUCyte™ HRP Polymer Antibody (VC001). Before incubation with the primary antibody, tissue was subjected to heat-induced epitope retrieval using Antigen Retrieval Reagent-Basic (CTS013). Tissue was stained using DAB (brown) and counterstained with hematoxylin (blue). Specific staining was localized to nuclei in neuron. Staining was performed using our protocol for IHC Staining with VisUCyte HRP Polymer Detection Reagents.
Detection of Human SOX1 by Simple WesternTM. Simple Western lane view shows lysates of undifferentiated iBJ6 human iPS cells and iBJ6 human iPS cells differentiated into neuroprogenitor cells, loaded at 0.2 mg/mL. A specific band was detected for SOX1 at approximately 50 kDa (as indicated) using 10 µg/mL of Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) followed by 1:50 dilution of HRP-conjugated Anti-Goat IgG Secondary Antibody (HAF109). This experiment was conducted under reducing conditions and using the 12-230 kDa separation system.
Detection of Human SOX1 by Immunocytochemistry/Immunofluorescence Characterization of NSCs and cortical neurons derived from FKRP‐ and CRISPR/Cas9 corrected‐iPSCsA, BRepresentative images of NSCs derived from FKRP‐ and corrected‐iPSC lines expressing SOX1, SOX2, and nestin.C, DQuantification of percentage of SOX1+ (C) and SOX2+ (D) cells in culture. The efficiency of neural induction is more than 99% in FKRP‐ and corrected‐iPSC (5D17, 5D23, and 3B17) lines. Data are mean ± s.d. n = 4 technical replicates.E, FFKRP‐ and corrected‐NSC lines can be further differentiated to cortical neural progenitor cells, expressing PAX6, OTX2, and vimentin.G–IQuantification of percentage of PAX6+ (G) and OTX2+ (H) cells in culture. About 91‐98% of cells derived from FKRP, 5D17, 5D23, and 3B17 NSC lines express PAX6 (G). About 93‐96% of cells derived from FKRP, 5D17, 5D23, and 3B17 NSC lines express OTX2 (H). Of the OTX2+ population, about 60‐67% cells are also Ki67+ cycling progenitors (I). Data are mean ± s.d. n = 4 technical replicates.J, KGlutamatergic projection neurons derived from FKRP and corrected (5D17, 5D23, and 3B17) progenitor cells. The vast majority of neurons contain vGlut1+ punctae in their neurites (labeled by Tuj1). Right panels are enlarged images from the insets of left panels.Data information: Scale bars, 50 μm. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/31566294), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human SOX1 by Immunocytochemistry/Immunofluorescence Characterization of NSCs and cortical neurons derived from FKRP‐ and CRISPR/Cas9 corrected‐iPSCsA, BRepresentative images of NSCs derived from FKRP‐ and corrected‐iPSC lines expressing SOX1, SOX2, and nestin.C, DQuantification of percentage of SOX1+ (C) and SOX2+ (D) cells in culture. The efficiency of neural induction is more than 99% in FKRP‐ and corrected‐iPSC (5D17, 5D23, and 3B17) lines. Data are mean ± s.d. n = 4 technical replicates.E, FFKRP‐ and corrected‐NSC lines can be further differentiated to cortical neural progenitor cells, expressing PAX6, OTX2, and vimentin.G–IQuantification of percentage of PAX6+ (G) and OTX2+ (H) cells in culture. About 91‐98% of cells derived from FKRP, 5D17, 5D23, and 3B17 NSC lines express PAX6 (G). About 93‐96% of cells derived from FKRP, 5D17, 5D23, and 3B17 NSC lines express OTX2 (H). Of the OTX2+ population, about 60‐67% cells are also Ki67+ cycling progenitors (I). Data are mean ± s.d. n = 4 technical replicates.J, KGlutamatergic projection neurons derived from FKRP and corrected (5D17, 5D23, and 3B17) progenitor cells. The vast majority of neurons contain vGlut1+ punctae in their neurites (labeled by Tuj1). Right panels are enlarged images from the insets of left panels.Data information: Scale bars, 50 μm. Image collected and cropped by CiteAb from the following publication (https://pubmed.ncbi.nlm.nih.gov/31566294), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human SOX1 by Immunocytochemistry/Immunofluorescence Expression of NSUN2 in the Human Developing Brain and NES Cells(A) DAPI-stained human embryo (6 weeks of gestation) marked for prosencephalon, mesencephalon, and rhombencephalon. Region in square is magnified in (B). Scale bar, 1 mm.(B) Prosencephalon labeled for NSUN2 and SOX1. Region in squares are magnified in (b′) and (b″). Arrows indicate NSUN2-positive cells. Scale bar, 100 μm.(C–F) Bright-field image (C) and immunofluorescence (D–F) of AF22 (upper panels) and Sai1 (lower panels) cells labeled for Nestin (D), SOX2 (E), and beta III-tubulin (F). Scale bar, 50 μm.(G and H) NES cells co-labeled for NSUN2 and Nestin (NES) (G) or SOX1 (H).(I) Differentiation protocol.(J–L) Differentiated AF22 and Sai1 cells (day 15) labeled for Nestin (NES; J), SOX2 (K), and beta III-tubulin (L). Scale bars: 50 μm.(M) Western blot for NSUN2, beta III-tubulin (TUBB3), GFAP, SOX2, and Nestin during differentiation (days). alpha -Tubulin served as loading control.Nuclei are counterstained with DAPI (A, B, D–F, J–L). Image collected and cropped by CiteAb from the following publication (https://linkinghub.elsevier.com/retrieve/pii/S2213671116302764), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human SOX1 by Immunocytochemistry/Immunofluorescence Expression of NSUN2 in the Human Developing Brain and NES Cells(A) DAPI-stained human embryo (6 weeks of gestation) marked for prosencephalon, mesencephalon, and rhombencephalon. Region in square is magnified in (B). Scale bar, 1 mm.(B) Prosencephalon labeled for NSUN2 and SOX1. Region in squares are magnified in (b′) and (b″). Arrows indicate NSUN2-positive cells. Scale bar, 100 μm.(C–F) Bright-field image (C) and immunofluorescence (D–F) of AF22 (upper panels) and Sai1 (lower panels) cells labeled for Nestin (D), SOX2 (E), and beta III-tubulin (F). Scale bar, 50 μm.(G and H) NES cells co-labeled for NSUN2 and Nestin (NES) (G) or SOX1 (H).(I) Differentiation protocol.(J–L) Differentiated AF22 and Sai1 cells (day 15) labeled for Nestin (NES; J), SOX2 (K), and beta III-tubulin (L). Scale bars: 50 μm.(M) Western blot for NSUN2, beta III-tubulin (TUBB3), GFAP, SOX2, and Nestin during differentiation (days). alpha -Tubulin served as loading control.Nuclei are counterstained with DAPI (A, B, D–F, J–L). Image collected and cropped by CiteAb from the following publication (https://linkinghub.elsevier.com/retrieve/pii/S2213671116302764), licensed under a CC-BY license. Not internally tested by R&D Systems.
Detection of Human SOX1 by Immunocytochemistry/Immunofluorescence GPI anchored proteins are required for neural differentiation.(A). Representative example of images of hiPSC-derived EBs and EB-derived rosettes during neural differentiation. Neural induction and rosette formation upon neural induction was assessed in three cell lines using a serum-free EB generation method. On day 2 (left) of hiPSC-derived EBs from PIGAwt, PIGAc.1234C>T, and PIGAnull after forced aggregation (20X magnification, scale bar is 50μm). On day 4 (middle), single homogeneous hiPSC-EBs collected were pooled in a 10 cm plate (4X magnification, scale bar is 100μm). On day 11 (right), neuroepithelial cells appeared and neural tube-like rosettes formed (EB-derived rosettes) and scale bar is 50μm. (B). Neural induction rates from EB-derived rosettes. The percentage of EB derived rosettes was 88.8% ± 4.6, 75.5% ± 9.8 and 68.4% ± 6.9 for PIGAwt, PIGAc.1234C>T, and PIGAnull, respectively. PIGAwt versus PIGAc.1234C>T (p>0.05, NS) and PIGAwt versus PIGAnull (*p<0.05, one way ANOVA and Multiple comparisons). Neural induction from PIGAnull hiPSCs was less than 70%. All values were mean ±SD. (C). Representative confocal images showing expression of neuron stem cell marker SOX1 (in red) combined proliferation by EdU labeling in hNPCs derived from isolated neural rosettes. Nuclei were visualized with DAPI (blue) and scale bar 100μm. (D). Representative confocal images showing expression of neuron progenitor marker PAX6 (in red) and combined proliferation by EdU (in green) in hNPCs derived from isolated neural rosettes. Nuclei were visualized with DAPI (blue) and scale bar 200μm. hNPCs from PIGAnull cell lines showed reduced expression of SOX1 and PAX6. (E). Proliferation rate in hNPCs was assessed and plotted in all three cell lines. EdU positive cells were counted and normalized by total number of nuclei staining with DAPI (blue). Proliferation was significantly decreased in PIGAnull and PIGAc.1234C>T compared to PIGAwt. (F). Graphs depict the percentage of positive cells for SOX-1 (left) and Pax6 (right) in hNPCs derived from PIGAwt, PIGAc.1234C>T, and PIGAnull hiPSC lines. The hNPCs derived from the PIGAnull hiPSCs showed significantly decreased expression of SOX1 and PAX6. Similar levels of SOX1 and PAX6 were expressed in hNPCs from PIGAwt and PIGAc.1234C>T. All values represent mean ± SD. Image collected and cropped by CiteAb from the following publication (https://dx.plos.org/10.1371/journal.pone.0174074), licensed under a CC-BY license. Not internally tested by R&D Systems.
Reconstitution Calculator
Preparation and Storage
- 12 months from date of receipt, -20 to -70 °C as supplied.
- 1 month, 2 to 8 °C under sterile conditions after reconstitution.
- 6 months, -20 to -70 °C under sterile conditions after reconstitution.
Background: SOX1
SOX1 is a 39 kDa transcription factor that belongs to the SOXB1 subgroup. Within the developing CNS, SOX1 maintains neural cells in an undifferentiated state and has been used as a marker for neural stem cells. Human and mouse SOX1 share 97% amino acid sequence identity.
Product Datasheets
Citations for Human/Mouse/Rat SOX1 Antibody
R&D Systems personnel manually curate a database that contains references using R&D Systems products. The data collected includes not only links to publications in PubMed, but also provides information about sample types, species, and experimental conditions.
135
Citations: Showing 1 - 10
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Distinct Molecular Trajectories Converge to Induce Naive Pluripotency
Authors: Hannah T. Stuart, Giuliano G. Stirparo, Tim Lohoff, Lawrence E. Bates, Masaki Kinoshita, Chee Y. Lim et al.
Cell Stem Cell
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Microglia-secreted TNF-alpha affects differentiation efficiency and viability of pluripotent stem cell-derived human dopaminergic precursors
Authors: Shirley D. Wenker, María Isabel Farias, Victoria Gradaschi, Corina Garcia, Juan Beauquis, María Celeste Leal et al.
PLoS One
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Early anteroposterior regionalisation of human neural crest is shaped by a pro-mesodermal factor
Authors: Antigoni Gogolou, Celine Souilhol, Ilaria Granata, Filip J Wymeersch, Ichcha Manipur, Matthew Wind et al.
eLife
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Comparison of two protocols for the generation of iPSC-derived human astrocytes
Authors: Patrycja Mulica, Carmen Venegas, Zied Landoulsi, Katja Badanjak, Sylvie Delcambre, Maria Tziortziou et al.
Biol Proced Online
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Loss of Protein Function Causing Severe Phenotypes of Female-Restricted Wieacker Wolff Syndrome due to a Novel Nonsense Mutation in the ZC4H2 Gene
Authors: Jing-Jing Sun, Qin Cai, Miao Xu, Yan-Na Liu, Wan-Rui Li, Juan Li et al.
Genes (Basel)
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An in vitro stem cell model of human epiblast and yolk sac interaction
Authors: KM Mackinlay, BA Weatherbee, V Souza Rosa, CE Handford, G Hudson, T Coorens, LV Pereira, S Behjati, L Vallier, MN Shahbazi, M Zernicka-G
Elife, 2021-08-17;10(0):.
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Human axial progenitors generate trunk neural crest cells in vitro
Authors: Thomas JR Frith, Ilaria Granata, Matthew Wind, Erin Stout, Oliver Thompson, Katrin Neumann et al.
eLife
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AKT constitutes a signal-promoted alternative exon-junction complex that regulates nonsense-mediated mRNA decay
Authors: Hana Cho, Elizabeth T. Abshire, Maximilian W. Popp, Christoph Pröschel, Joshua L. Schwartz, Gene W. Yeo et al.
Molecular Cell
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Geminin is required for Hox gene regulation to pattern the developing limb
Authors: Emily M.A. Lewis, Savita Sankar, Caili Tong, Ethan S. Patterson, Laura E. Waller, Paul Gontarz et al.
Developmental Biology
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A New Approach to Generate Gastruloids to Develop Anterior Neural Tissues
Authors: Mehmet Girgin, Nicolas Broguiere, Lorenzo Mattolini, Matthias Lutolf
BIO-PROTOCOL
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An automated do-it-yourself system for dynamic stem cell and organoid culture in standard multi-well plates
Authors: Julia Tischler, Zoe Swank, Hao-An Hsiung, Stefano Vianello, Matthias P. Lutolf, Sebastian J. Maerkl
Cell Reports Methods
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iPSC-derived neurons profiling reveals GABAergic circuit disruption and acetylated alpha -tubulin defect which improves after iHDAC6 treatment in Rett syndrome
Authors: Elisa Landucci, Margherita Brindisi, Laura Bianciardi, Lorenza M. Catania, Sergio Daga, Susanna Croci et al.
Experimental Cell Research
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Mesenchymal properties of iPSC-derived neural progenitors that generate undesired grafts after transplantation
Authors: Miho Isoda, Tsukasa Sanosaka, Ryo Tomooka, Yo Mabuchi, Munehisa Shinozaki, Tomoko Andoh-Noda et al.
Communications Biology
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The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia
Authors: Ralda Nehme, Olli Pietiläinen, Mykyta Artomov, Matthew Tegtmeyer, Vera Valakh, Leevi Lehtonen et al.
Nature Communications
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Dysregulated Glial Differentiation in Schizophrenia May Be Relieved by Suppression of SMAD4- and REST-Dependent Signaling
Authors: Z Liu, M Osipovitch, A Benraiss, NPT Huynh, R Foti, J Bates, D Chandler-M, RL Findling, PJ Tesar, M Nedergaard, MS Windrem, SA Goldman
Cell Rep, 2019-06-25;27(13):3832-3843.e6.
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Single-cell RNA sequencing of neural stem cells derived from human trisomic iPSCs reveals the abnormalities during neural differentiation of Down syndrome
Authors: Jia-jun Qiu, Yan-na Liu, Hao Wei, Fanyi Zeng, Jing-bin Yan
Frontiers in Molecular Neuroscience
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A human isogenic iPSC-derived cell line panel identifies major regulators of aberrant astrocyte proliferation in Down syndrome
Authors: Keiji Kawatani, Toshihiko Nambara, Nobutoshi Nawa, Hidetaka Yoshimatsu, Haruna Kusakabe, Katsuya Hirata et al.
Communications Biology
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Telomere Attrition in Induced Pluripotent Stem Cell-Derived Neurons From ALS/FTD-Related C9ORF72 Repeat Expansion Carriers
Authors: Hayley Robinson, Sk Imran Ali, Martha Elena Diaz-Hernandez, Rodrigo Lopez-Gonzalez
Frontiers in Cell and Developmental Biology
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Environmentally relevant developmental methylmercury exposures alter neuronal differentiation in a human-induced pluripotent stem cell model
Authors: Lisa M. Prince, M. Diana Neely, Emily B. Warren, Morgan G. Thomas, Madeline R. Henley, Kiara K. Smith et al.
Food and Chemical Toxicology
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Impaired mitochondrial–endoplasmic reticulum interaction and mitophagy in Miro1-mutant neurons in Parkinson’s disease
Authors: Clara Berenguer-Escuder, Dajana Grossmann, Paul Antony, Giuseppe Arena, Kobi Wasner, François Massart et al.
Human Molecular Genetics
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Human iNPC therapy leads to improvement in functional neurologic outcomes in a pig ischemic stroke model
Authors: Vivian W. Lau, Simon R. Platt, Harrison E. Grace, Emily W. Baker, Franklin D. West
Brain and Behavior
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Spinal dI4 Interneuron Differentiation From Human Pluripotent Stem Cells
Authors: Jia Xu, Liang-Jiang Huang, Zhengyu Fang, Hong-Mei Luo, Yun-Qiang Chen, Ya-Jie Li et al.
Frontiers in Molecular Neuroscience
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Epigenetic Modulation of Human Induced Pluripotent Stem Cell Differentiation to Oligodendrocytes
Authors: Panagiotis Douvaras, Tomasz Rusielewicz, Kwi Hye Kim, Jeffery D. Haines, Patrizia Casaccia, Valentina Fossati
International Journal of Molecular Sciences
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Rostrocaudal Areal Patterning of Human PSC-Derived Cortical Neurons by FGF8 Signaling
Authors: Kent Imaizumi, Koki Fujimori, Seiji Ishii, Asako Otomo, Yasushi Hosoi, Hiroaki Miyajima et al.
eNeuro
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iPS-derived neural stem cells for disease modeling and evaluation of therapeutics for mucopolysaccharidosis type II
Authors: Junjie Hong, Yu-Shan Cheng, Shu Yang, Manju Swaroop, Miao Xu, Jeanette Beers et al.
Experimental Cell Research
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Selective Ablation of Tumorigenic Cells Following Human Induced Pluripotent Stem Cell-Derived Neural Stem/Progenitor Cell Transplantation in Spinal Cord Injury
Authors: Kota Kojima, Hiroyuki Miyoshi, Narihito Nagoshi, Jun Kohyama, Go Itakura, Soya Kawabata et al.
Stem Cells Translational Medicine
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KIF1A, R1457Q, and P1688L Mutations Induce Protein Abnormal Aggregation and Autophagy Impairment in iPSC-Derived Motor Neurons
Authors: Zhao, M;Wang, J;Liu, M;Xu, Y;Huang, J;Zhang, Y;He, J;Gu, A;Liu, M;Liu, X;
Biomedicines
Species: Human
Sample Types: Whole Cells
Applications: Immunocytochemistry -
Generation of a human induced pluripotent stem cell line from a patient with GM3 synthase deficiency using self-replicating RNA vector
Authors: Tonin, R;Feo, F;Falliano, S;Giunti, L;Calamai, M;Procopio, E;Mari, F;Sciruicchio, V;Conti, V;Fanelli, I;Bambi, F;Guerrini, R;Morrone, A;
Stem cell research
Species: Human
Sample Types: Whole Cells
Applications: Immunocytochemistry -
Human-Induced Pluripotent Stem Cell-Derived Neural Progenitor Cells Showed Neuronal Differentiation, Neurite Extension, and Formation of Synaptic Structures in Rodent Ischemic Stroke Brains
Authors: Kanemura, Y;Yamamoto, A;Katsuma, A;Fukusumi, H;Shofuda, T;Kanematsu, D;Handa, Y;Sumida, M;Yoshioka, E;Mine, Y;Yamaguchi, R;Okada, M;Igarashi, M;Sekino, Y;Shirao, T;Nakamura, M;Okano, H;
Cells
Species: Human, Xenograft
Sample Types: Whole Cells, Whole Tissue
Applications: Immunohistochemistry, Immunocytochemistry -
Harnessing developmental dynamics of spinal cord extracellular matrix improves regenerative potential of spinal cord organoids
Authors: Sun, Z;Chen, Z;Yin, M;Wu, X;Guo, B;Cheng, X;Quan, R;Sun, Y;Zhang, Q;Fan, Y;Jin, C;Yin, Y;Hou, X;Liu, W;Shu, M;Xue, X;Shi, Y;Chen, B;Xiao, Z;Dai, J;Zhao, Y;
Cell stem cell
Species: Rabbit, Rat
Sample Types: Organoid
Applications: Immunohistochemistry -
TREX tetramer disruption alters RNA processing necessary for corticogenesis in THOC6 Intellectual Disability Syndrome
Authors: Werren, EA;LaForce, GR;Srivastava, A;Perillo, DR;Li, S;Johnson, K;Baris, S;Berger, B;Regan, SL;Pfennig, CD;de Munnik, S;Pfundt, R;Hebbar, M;Jimenez-Heredia, R;Karakoc-Aydiner, E;Ozen, A;Dmytrus, J;Krolo, A;Corning, K;Prijoles, EJ;Louie, RJ;Lebel, RR;Le, TL;Amiel, J;Gordon, CT;Boztug, K;Girisha, KM;Shukla, A;Bielas, SL;Schaffer, AE;
Nature communications
Species: Human, Mouse
Sample Types: Embryo, Organoid
Applications: IHC -
Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids
Authors: Capauto, D;Wang, Y;Wu, F;Norton, S;Mariani, J;Inoue, F;Crawford, GE;Ahituv, N;Abyzov, A;Vaccarino, FM;
Scientific reports
Species: Human
Sample Types: Whole Cells
Applications: Immunocytochemistry -
BAF45D-binding to HOX genes was differentially targeted in H9-derived spinal cord neural stem cells
Authors: Liu, C;Xie, Y;Chen, X;Liu, L;Liu, C;Yin, Z;
Scientific reports
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of a human induced pluripotent stem cell line (SMUSHi002-A) from an ALS patient carrying a heterozygous mutation c.1562G > A in the FUS gene
Authors: Tang, M;Xiong, M;Zhou, W;Lei, J;Huang, M;Huang, C;Wang, F;Liu, J;Li, J;Xu, X;
Stem cell research
Species: Human
Sample Types: Whole Cells
Applications: IHC/IF, Flow Cytometry -
Preclinical and dose-ranging assessment of hESC-derived dopaminergic progenitors for a clinical trial on Parkinson's disease
Authors: Park, S;Park, CW;Eom, JH;Jo, MY;Hur, HJ;Choi, SK;Lee, JS;Nam, ST;Jo, KS;Oh, YW;Lee, J;Kim, S;Kim, DH;Park, CY;Kim, SJ;Lee, HY;Cho, MS;Kim, DS;Kim, DW;
Cell stem cell
Species: Human
Sample Types: Whole Cells
Applications: Immunocytochemistry -
Generation of locus coeruleus norepinephrine neurons from human pluripotent stem cells
Authors: Tao, Y;Li, X;Dong, Q;Kong, L;Petersen, AJ;Yan, Y;Xu, K;Zima, S;Li, Y;Schmidt, DK;Ayala, M;Mathivanan, S;Sousa, AMM;Chang, Q;Zhang, SC;
Nature biotechnology
Species: Mouse
Sample Types: Whole Cells, Whole Tissue
Applications: Flow Cytometry, IHC -
The vitamin D receptor agonist EB1089 can exert its antiviral activity independently of the vitamin D receptor
Authors: Jaratsittisin, J;Sornjai, W;Chailangkarn, T;Jongkaewwattana, A;Smith, DR;
PloS one
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Determinants of astrocytic pathology in stem cell models of primary tauopathies
Authors: Fiock, KL;Hook, JN;Hefti, MM;
Acta neuropathologica communications
Species: Human
Sample Types: Whole Cells
Applications: Bioassay -
Generation and characterization of induced pluripotent stem cells from a Parkinson's disease patient carrying the digenic LRRK2 p.G2019S and GBA1 p.N409S mutations
Authors: Oleksy, C;Massart, F;Goldwurm, S;Arado, A;Arena, G;Boussaad, I;Krüger, R;
Stem cell research
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Characterization of an induced pluripotent stem cell line NCHi011-A from a 23-year-old female with Alagille Syndrome harboring a heterozygous JAG1 pathogenic variant
Authors: Stanberry, I;Cunningham, D;Ye, S;Alonzo, M;Zhao, MT;Garg, V;Lilly, B;
Stem cell research
Species: Human
Sample Types: Whole Cells
Applications: ICC -
RBL2-E2F-GCN5 guide cell fate decisions during tissue specification by regulating cell-cycle-dependent fluctuations of non-cell-autonomous signaling
Authors: Militi, S;Nibhani, R;Jalali, M;Pauklin, S;
Cell reports
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Characterization of enhancer activity in early human neurodevelopment using Massively parallel reporter assay (MPRA) and forebrain organoids
Authors: Capauto, D;Wang, Y;Wu, F;Norton, S;Mariani, J;Inoue, F;Crawford, GE;PsychENCODE Consortium, ;Ahituv, N;Abyzov, A;Vaccarino, FM;
bioRxiv : the preprint server for biology
Species: Human
Sample Types: Organoids
Applications: IHC -
Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis
Authors: Jourdon, A;Wu, F;Mariani, J;Capauto, D;Norton, S;Tomasini, L;Amiri, A;Suvakov, M;Schreiner, JD;Jang, Y;Panda, A;Nguyen, CK;Cummings, EM;Han, G;Powell, K;Szekely, A;McPartland, JC;Pelphrey, K;Chawarska, K;Ventola, P;Abyzov, A;Vaccarino, FM;
Nature neuroscience
Species: Human
Sample Types: Organoids
Applications: IHC -
Generation of iPSC line NCHi012-A from a patient with Alagille syndrome and heterozygous pathogenic variant in the JAG1 gene
Authors: Cunningham, D;Stanberry, I;Ye, S;Alonzo, M;Zhao, MT;Garg, V;Lilly, B;
Stem cell research
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Mitotic bookmarking by SWI/SNF subunits
Authors: Zhu, Z;Chen, X;Guo, A;Manzano, T;Walsh, PJ;Wills, KM;Halliburton, R;Radko-Juettner, S;Carter, RD;Partridge, JF;Green, DR;Zhang, J;Roberts, CWM;
Nature
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
An Alzheimer's disease risk variant in TTC3 modifies the actin cytoskeleton organization and the PI3K-Akt signaling pathway in iPSC-derived forebrain neurons
Authors: Cukier, HN;Duarte, CL;Laverde-Paz, MJ;Simon, SA;Van Booven, DJ;Miyares, AT;Whitehead, PL;Hamilton-Nelson, KL;Adams, LD;Carney, RM;Cuccaro, ML;Vance, JM;Pericak-Vance, MA;Griswold, AJ;Dykxhoorn, DM;
bioRxiv : the preprint server for biology
Species: Human
Sample Types: Whole Cells
Applications: ICC -
SOX1 Functions as a Tumor Suppressor by Repressing HES1 in Lung Cancer
Authors: Chang, SY;Wu, TH;Shih, YL;Chen, YC;Su, HY;Chian, CF;Lin, YW;
Cancers
Species: Human
Sample Types: Cell Lysates, Whole Cells
Applications: ICC, Western Blot -
Integrated transcriptome and proteome analysis reveals posttranscriptional regulation of ribosomal genes in human brain organoids
Authors: J Sidhaye, P Trepte, N Sepke, M Novatchkov, M Schutzbier, G Dürnberger, K Mechtler, JA Knoblich
Elife, 2023-03-29;12(0):.
Species: Mouse
Sample Types: Whole Tissue
Applications: IHC -
Large-scale organoid study suggests effects of trisomy 21 on early fetal neurodevelopment are more subtle than variability between isogenic lines and experiments
Authors: JT Czerminski, OD King, JB Lawrence
Frontiers in Neuroscience, 2023-02-03;16(0):972201.
Species: Human
Sample Types: Organoid
Applications: IHC -
ZFP462 safeguards neural lineage specification by targeting G9A/GLP-mediated heterochromatin to silence enhancers
Authors: R Yelagandul, K Stecher, M Novatchkov, L Michetti, G Michlits, J Wang, P Hofbauer, G Vainorius, C Pribitzer, L Isbel, S Mendjan, D Schübeler, U Elling, J Brennecke, O Bell
Nature Cell Biology, 2023-01-05;0(0):.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
Mutations in the transcriptional regulator MeCP2 severely impact key cellular and molecular signatures of human astrocytes during maturation
Authors: J Sun, S Osenberg, A Irwin, LH Ma, N Lee, Y Xiang, F Li, YW Wan, IH Park, M Maletic-Sa, N Ballas
Cell Reports, 2023-01-05;42(1):111942.
Species: Human
Sample Types: Organoid
Applications: IHC -
Generation of a human iPSC line (CIBi014-A) from a patient with Parkinson's disease carrying a novel heterozygotic PARK8 (LRRK2) mutation
Authors: L Li, X Si, J Yang, M Lei, H Liu, J Ruan, H Fu, W Li, H Yang, X Lei, H Sang
Stem Cell Research, 2022-12-09;66(0):102995.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Mispatterning and interneuron deficit in Tourette Syndrome basal ganglia organoids
Authors: MV Brady, J Mariani, Y Koca, A Szekely, RA King, MH Bloch, A Landeros-W, JF Leckman, FM Vaccarino
Molecular Psychiatry, 2022-11-29;0(0):.
Species: Human
Sample Types: Organoid
Applications: IHC -
Generation and characterization of a human induced pluripotent stem cell (iPSC) line from a patient with congenital heart disease (CHD)
Authors: H Lin, SQ Ye, ZH Xu, JS Penaloza, M Aljuhani, T Vetter, MT Zhao, KL McBride
Stem Cell Research, 2022-10-31;65(0):102958.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
The RNA helicase DDX6 controls early mouse embryogenesis by repressing aberrant inhibition of BMP signaling through miRNA-mediated gene silencing
Authors: Kim J, Muraoka M, Okada H et al.
PLOS Genetics
-
Transplantation of Human Induced Pluripotent Stem Cell-Derived Neural Progenitor Cells Promotes Forelimb Functional Recovery after Cervical Spinal Cord Injury
Authors: Y Zheng, CM Gallegos, H Xue, S Li, DH Kim, H Zhou, X Xia, Y Liu, Q Cao
Cells, 2022-09-05;11(17):.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Aberrant induction of p19Arf-mediated cellular senescence contributes to neurodevelopmental defects
Authors: M Rhinn, I Zapata-Bod, A Klein, JL Plassat, T Knauer-Mey, WM Keyes
PloS Biology, 2022-06-14;20(6):e3001664.
Species: Human
Sample Types: Organoids
Applications: IHC -
Generation and characterization of a genetic Parkinson's disease-patient derived iPSC line DJ-1-delP (LCSBi008-A)
Authors: P Mencke, I Boussaad, G Önal, AJA Kievit, AJW Boon, W Mandemaker, V Bonifati, R Krüger
Stem Cell Research, 2022-04-26;62(0):102792.
Species: Human
Sample Types: Transfected Whole Cells
Applications: ICC -
Generation of the human induced pluripotent stem cell line (IBKMOLi002-A) from PBMCs of a patient carrying the heterozygous L271H mutation of the voltage-gated calcium channel subunit Cav1.3-encoding CACNA1D gene
Authors: M Tisch, M Carmen De, M Suarez-Cub, C Fauth, M Defrancesc, J Zschocke, K Günther, F Edenhofer
Stem Cell Research, 2022-04-09;61(0):102784.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by repressing pro-differentiation genes
Authors: Görkem Garipler, Congyi Lu, Alexis Morrissey, Lorena S. Lopez-Zepeda, Yingzhen Pei, Simon E. Vidal et al.
Cell Reports
-
The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by repressing pro-differentiation genes
Authors: Görkem Garipler, Congyi Lu, Alexis Morrissey, Lorena S. Lopez-Zepeda, Yingzhen Pei, Simon E. Vidal et al.
Cell Reports
-
BRN2 as a key gene drives the early primate telencephalon development
Authors: X Zhu, Y Guo, C Chu, D Liu, K Duan, Y Yin, C Si, Y Kang, J Yao, X Du, J Li, S Zhao, Z Ai, Q Zhu, W Ji, Y Niu, T Li
Science Advances, 2022-03-04;8(9):eabl7263.
Species: Primate (Macaca fascicularis)
Sample Types: Whole Tissue
Applications: IHC -
G-quadruplex DNA structures in human stem cells and differentiation
Authors: KG Zyner, A Simeone, SM Flynn, C Doyle, G Marsico, S Adhikari, G Portella, D Tannahill, S Balasubram
Nature Communications, 2022-01-10;13(1):142.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Down-syndrome-induced senescence disrupts the nuclear architecture of neural progenitors
Authors: HS Meharena, A Marco, V Dileep, ER Lockshin, GY Akatsu, J Mullahoo, LA Watson, T Ko, LN Guerin, F Abdurrob, S Rengarajan, M Papanastas, JD Jaffe, LH Tsai
Cell Stem Cell, 2022-01-06;29(1):116-130.e7.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Chemically induced senescence in human stem cell-derived neurons promotes phenotypic presentation of neurodegeneration
Authors: Fathi A, Mathivanan S, Kong L et al.
Aging Cell
-
Orphan CpG islands amplify poised enhancer regulatory activity and determine target gene responsiveness
Authors: T Pachano, V Sánchez-Ga, T Ealo, M Mariner-Fa, T Bleckwehl, HG Asenjo, P Respuela, S Cruz-Molin, M Muñoz-San, E Haro, WFJ van IJcken, D Landeira, A Rada-Igles
Nature Genetics, 2021-06-28;53(7):1036-1049.
Species: Mouse
Sample Types: Whole Cells
Applications: IHC -
Derivation of iPSC line UMi029-A bearing a hearing-loss associated variant in the SMPX gene
Authors: DM Dykxhoorn, X Tong, NC Gosstola, XZ Liu
Stem Cell Research, 2021-05-24;54(0):102405.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Donor cell memory confers a metastable state of directly converted cells
Authors: KP Kim, C Li, D Bunina, HW Jeong, J Ghelman, J Yoon, B Shin, H Park, DW Han, JB Zaugg, J Kim, T Kuhlmann, RH Adams, KM Noh, SA Goldman, HR Schöler
Cell Stem Cell, 2021-04-12;0(0):.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
Organoid modeling of Zika and herpes simplex virus 1 infections reveals virus-specific responses leading to microcephaly
Authors: V Krenn, C Bosone, TR Burkard, J Spanier, U Kalinke, A Calistri, C Salata, R Rilo Chris, P Pestana Ga, A Mirazimi, JA Knoblich
Cell Stem Cell, 2021-04-09;0(0):.
Species: Human
Sample Types: Organoid
Applications: IHC -
Human spinal GABA neurons alleviate spasticity and improve locomotion in rats with spinal cord injury
Authors: C Gong, X Zheng, F Guo, Y Wang, S Zhang, J Chen, X Sun, SZA Shah, Y Zheng, X Li, Y Yin, Q Li, X Huang, T Guo, X Han, SC Zhang, W Wang, H Chen
Cell Reports, 2021-03-23;34(12):108889.
Species: Rat
Sample Types: Whole Tissue
Applications: IHC -
A Human Induced Pluripotent Stem Cell-Derived Isogenic Model of Huntington's Disease Based on Neuronal Cells Has Several Relevant Phenotypic Abnormalities
Authors: T Malankhano, L Suldina, E Grigor'eva, S Medvedev, J Minina, K Morozova, E Kiseleva, S Zakian, A Malakhova
J Pers Med, 2020-11-09;10(4):.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Development of an ObLiGaRe Doxycycline Inducible Cas9 system for pre-clinical cancer drug discovery
Authors: A Lundin, MJ Porritt, H Jaiswal, F Seeliger, C Johansson, AW Bidar, L Badertsche, S Wimberger, EJ Davies, E Hardaker, CP Martins, E James, T Admyre, A Taheri-Gha, J Bradley, A Schantz, B Alaeimahab, M Clausen, X Xu, LM Mayr, R Nitsch, M Bohlooly-Y, ST Barry, M Maresca
Nat Commun, 2020-09-29;11(1):4903.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
A Shh/Gli-driven three-node timer motif controls temporal identity and fate of neural stem cells
Authors: JM Dias, Z Alekseenko, A Jeggari, M Boareto, J Vollmer, M Kozhevniko, H Wang, MP Matise, A Alexeyenko, D Iber, J Ericson
Science Advances, 2020-09-16;6(38):.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
4-Phenylbutyrate ameliorates apoptotic neural cell death in Down syndrome by reducing protein aggregates
Authors: K Hirata, T Nambara, K Kawatani, N Nawa, H Yoshimatsu, H Kusakabe, K Banno, K Nishimura, M Ohtaka, M Nakanishi, H Taniguchi, H Arahori, K Wada, K Ozono, Y Kitabatake
Sci Rep, 2020-08-20;10(1):14047.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
IPSC-Derived Neuronal Cultures Carrying the Alzheimer's Disease Associated TREM2 R47H Variant Enables the Construction of an A&beta-Induced Gene Regulatory Network
Authors: S Martins, A Müller-Sch, L Erichsen, M Bohndorf, W Wruck, K Sleegers, C Van Broeck, C Korth, J Adjaye
Int J Mol Sci, 2020-06-25;21(12):.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of human induced pluripotent stem cell line LUMCi027-A and its isogenic gene-corrected line from a patient affected by arrhythmogenic cardiomyopathy and carrying the c.2013delC PKP2 mutation
Authors: V Meraviglia, CH Arendzen, M Tok, C Freund, AS Maione, E Sommariva, M Bellin
Stem Cell Res, 2020-05-05;46(0):101835.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of two human induced pluripotent stem cell lines, LUMCi020-A and LUMCi021-A, from two patients with Catecholaminergic Polymorphic Ventricular Tachycardia carrying heterozygous mutations in the RYR2 gene
Authors: V Meraviglia, CH Arendzen, C Freund, DE Atsma, CL Mummery, M Bellin
Stem Cell Res, 2020-04-08;45(0):101764.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Wnt Inhibition Facilitates RNA-Mediated Reprogramming of Human Somatic Cells to Naive Pluripotency
Authors: N Bredenkamp, J Yang, J Clarke, GG Stirparo, F von Meyenn, S Dietmann, D Baker, R Drummond, Y Ren, D Li, C Wu, M Rostovskay, S Eminli-Mei, A Smith, G Guo
Stem Cell Reports, 2019-11-07;13(6):1083-1098.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of complex human organoid models including vascular networks by incorporation of mesodermal progenitor cells
Authors: P Wörsdörfer, N Dalda, A Kern, S Krüger, N Wagner, CK Kwok, E Henke, S Ergün
Sci Rep, 2019-10-30;9(1):15663.
Species: Human
Sample Types: Whole Tissue
Applications: IHC-P -
The RNA Helicase DDX6 Controls Cellular Plasticity by Modulating P-Body Homeostasis
Authors: B Di Stefano, EC Luo, C Haggerty, S Aigner, J Charlton, J Brumbaugh, F Ji, I Rabano Jim, KJ Clowers, AJ Huebner, K Clement, I Lipchina, MAC de Kort, A Anselmo, J Pulice, MFM Gerli, H Gu, SP Gygi, RI Sadreyev, A Meissner, GW Yeo, K Hochedling
Cell Stem Cell, 2019-10-03;0(0):.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Establishment of PITX3-mCherry knock-in reporter human embryonic stem cell line (WAe009-A-23)
Authors: S Park, JE Yoo, DR Lee, J Jang, MS Cho, DS Kim, DW Kim
Stem Cell Res, 2019-07-18;39(0):101499.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Engineering Genetic Predisposition in Human Neuroepithelial Stem Cells Recapitulates Medulloblastoma Tumorigenesis
Authors: M Huang, J Tailor, Q Zhen, AH Gillmor, ML Miller, H Weishaupt, J Chen, T Zheng, EK Nash, LK McHenry, Z An, F Ye, Y Takashima, J Clarke, H Ayetey, FMG Cavalli, B Luu, BS Moriarity, S Ilkhanizad, L Chavez, C Yu, KM Kurian, T Magnaldo, N Sevenet, P Koch, SM Pollard, P Dirks, MP Snyder, DA Largaespad, YJ Cho, JJ Phillips, FJ Swartling, AS Morrissy, M Kool, SM Pfister, MD Taylor, A Smith, WA Weiss
Cell Stem Cell, 2019-06-13;0(0):.
Species: Human
Sample Types: Whole Tissue
Applications: IHC -
Direct Reprogramming of Human Neurons Identifies MARCKSL1 as a Pathogenic Mediator of Valproic Acid-Induced Teratogenicity
Authors: S Chanda, CE Ang, QY Lee, M Ghebrial, D Haag, Y Shibuya, M Wernig, TC Südhof
Cell Stem Cell, 2019-05-30;25(1):103-119.e6.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
A transient DMSO treatment increases the differentiation potential of human pluripotent stem cells through the Rb family
Authors: J Li, C Narayanan, J Bian, D Sambo, T Brickler, W Zhang, S Chetty
PLoS ONE, 2018-12-12;13(12):e0208110.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Improving Cell Survival in Injected Embryos Allows Primed Pluripotent Stem Cells to Generate Chimeric Cynomolgus Monkeys
Authors: Y Kang, Z Ai, K Duan, C Si, Y Wang, Y Zheng, J He, Y Yin, S Zhao, B Niu, X Zhu, L Liu, L Xiang, L Zhang, Y Niu, W Ji, T Li
Cell Rep, 2018-11-27;25(9):2563-2576.e9.
Species: Primate - Macaca fascicularis (Crab-eating Monkey or Cynomolgus Macaque)
Sample Types: Whole Cells
Applications: ICC -
Rapid functional genetics of the oligodendrocyte lineage using pluripotent stem cells
Authors: AM Lager, OG Corradin, JM Cregg, MS Elitt, HE Shick, BLL Clayton, KC Allan, HE Olsen, M Madhavan, PJ Tesar
Nat Commun, 2018-09-13;9(1):3708.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
Combinatorial Smad2/3 Activities Downstream of Nodal Signaling Maintain Embryonic/Extra-Embryonic Cell Identities during Lineage Priming
Authors: AD Senft, I Costello, HW King, AW Mould, EK Bikoff, EJ Robertson
Cell Rep, 2018-08-21;24(8):1977-1985.e7.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Chronic Electrical Stimulation Promotes the Excitability and Plasticity of ESC-derived Neurons following Glutamate-induced Inhibition In vitro
Authors: CV Latchouman, L Jackson, MSE Sendi, KF Tehrani, LJ Mortensen, SL Stice, M Ghovanloo, L Karumbaiah
Sci Rep, 2018-07-19;8(1):10957.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
TFAP2C regulates transcription in human naive pluripotency by opening enhancers
Authors: WA Pastor, W Liu, D Chen, J Ho, R Kim, TJ Hunt, A Lukianchik, X Liu, JM Polo, SE Jacobsen, AT Clark
Nat. Cell Biol., 2018-04-25;20(5):553-564.
Species: Human
Sample Types: Cell Lysates
Applications: Western Blot -
Wnt signal activation induces midbrain specification through direct binding of the beta-catenin/TCF4 complex to the EN1 promoter in human pluripotent stem cells
Authors: JY Kim, JS Lee, HS Hwang, DR Lee, CY Park, SJ Jung, YR You, DS Kim, DW Kim
Exp. Mol. Med., 2018-04-13;50(4):24.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Coordinated Control of mRNA and rRNA Processing Controls Embryonic Stem Cell Pluripotency and Differentiation
Authors: NS Corsini, AM Peer, P Moeseneder, M Roiuk, TR Burkard, HC Theussl, I Moll, JA Knoblich
Cell Stem Cell, 2018-04-05;22(4):543-558.e12.
Species: Mouse
Sample Types: Whole Tissue
Applications: IHC -
Highly efficient methods to obtain homogeneous dorsal neural progenitor cells from human and mouse embryonic stem cells and induced pluripotent stem cells
Authors: M Zhang, J Ngo, F Pirozzi, YP Sun, A Wynshaw-Bo
Stem Cell Res Ther, 2018-03-15;9(1):67.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Generation of iPSCs carrying a common LRRK2 risk allele for in vitro modeling of idiopathic Parkinson's disease
Authors: L Marrone, C Bus, D Schöndorf, JC Fitzgerald, M Kübler, B Schmid, P Reinhardt, L Reinhardt, M Deleidi, T Levin, A Meixner, B Klink, M Glatza, CJ Gloeckner, T Gasser, J Sternecker
PLoS ONE, 2018-03-07;13(3):e0192497.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Defined Culture Conditions Accelerate Small-molecule-assisted Neural Induction for the Production of Neural Progenitors from Human-induced Pluripotent Stem Cells
Authors: P Walsh, V Truong, C Hill, ND Stoflet, J Baden, WC Low, SA Keirstead, JR Dutton, AM Parr
Cell Transplant, 2017-12-01;26(12):1890-1902.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells
Authors: Y Li, R Wang, N Qiao, G Peng, K Zhang, K Tang, JJ Han, N Jing
J. Biol. Chem., 2017-09-26;292(48):19590-19604.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
A hypomorphic PIGA gene mutation causes severe defects in neuron development and susceptibility to complement-mediated toxicity in a human iPSC model
Authors: X Yuan, Z Li, AC Baines, E Gavriilaki, Z Ye, Z Wen, EM Braunstein, LG Biesecker, L Cheng, X Dong, RA Brodsky
PLoS ONE, 2017-04-25;12(4):e0174074.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Modeling the Mutational and Phenotypic Landscapes of Pelizaeus-Merzbacher Disease with Human iPSC-Derived Oligodendrocytes
Authors: ZS Nevin, DC Factor, RT Karl, P Douvaras, J Laukka, MS Windrem, SA Goldman, V Fossati, GM Hobson, PJ Tesar
Am. J. Hum. Genet., 2017-03-30;100(4):617-634.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Differentiation of oligodendrocyte progenitor cells from dissociated monolayer and feeder-free cultured pluripotent stem cells
Authors: T Yamashita, Y Miyamoto, Y Bando, T Ono, S Kobayashi, A Doi, T Araki, Y Kato, T Shirakawa, Y Suzuki, J Yamauchi, S Yoshida, N Sato
PLoS ONE, 2017-02-13;12(2):e0171947.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Dynamic behaviour of human neuroepithelial cells in the developing forebrain
Authors: L Subramania, M Bershteyn, MF Paredes, AR Kriegstein
Nat Commun, 2017-01-31;8(0):14167.
Species: Human
Sample Types: Whole Tissue
Applications: IHC -
Human iPSC-Derived Cerebral Organoids Model Cellular Features of Lissencephaly and Reveal Prolonged Mitosis of Outer Radial Glia
Authors: M Bershteyn, TJ Nowakowski, AA Pollen, E Di Lullo, A Nene, A Wynshaw-Bo, AR Kriegstein
Cell Stem Cell, 2017-01-19;0(0):.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Cytosine-5 RNA Methylation Regulates Neural Stem Cell Differentiation and�Motility
Stem Cell Reports, 2016-12-29;0(0):.
Species: Mouse
Sample Types: Whole Tissue
Applications: IHC -
Direct induction of neural progenitor cells transiently passes through a partially reprogrammed state
Authors: Rui Gao
Biomaterials, 2016-12-10;119(0):53-67.
Species: Mouse
Sample Types: Whole Cells
Applications: IHC -
Induced Pluripotent Stem Cells for Disease Modeling and Evaluation of Therapeutics for Niemann-Pick Disease Type A
Stem Cells Transl Med, 2016-08-02;0(0):.
Species: Human
Sample Types: Whole Cells
Applications: IHC-Fr -
Design of a Vitronectin-Based Recombinant Protein as a Defined Substrate for Differentiation of Human Pluripotent Stem Cells into Hepatocyte-Like Cells.
Authors: Nagaoka M, Kobayashi M, Kawai C, Mallanna S, Duncan S
PLoS ONE, 2015-08-26;10(8):e0136350.
Species: Human
Sample Types: Whole Cells
Applications: IHC -
Automated, high-throughput derivation, characterization and differentiation of induced pluripotent stem cells.
Authors: Paull D, Sevilla A, Zhou H, Hahn A, Kim H, Napolitano C, Tsankov A, Shang L, Krumholz K, Jagadeesan P, Woodard C, Sun B, Vilboux T, Zimmer M, Forero E, Moroziewicz D, Martinez H, Malicdan M, Weiss K, Vensand L, Dusenberry C, Polus H, Sy K, Kahler D, Gahl W, Solomon S, Chang S, Meissner A, Eggan K, Noggle S
Nat Methods, 2015-08-03;12(9):885-92.
Species: Mouse
Sample Types: Whole Cells
Applications: IHC -
Derivation and long-term culture of transgene-free human induced pluripotent stem cells on synthetic substrates.
Authors: Villa-Diaz L, Kim J, Lahann J, Krebsbach P
Stem Cells Transl Med, 2014-10-13;3(12):1410-7.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
iPSC-Derived neural stem cells act via kinase inhibition to exert neuroprotective effects in spinal muscular atrophy with respiratory distress type 1.
Authors: Simone C, Nizzardo M, Rizzo F, Ruggieri M, Riboldi G, Salani S, Bucchia M, Bresolin N, Comi G, Corti S
Stem Cell Reports, 2014-07-04;3(2):297-311.
Species: Human
Sample Types: Whole Cells
Applications: IHC -
Lineage-specific splicing of a brain-enriched alternative exon promotes glioblastoma progression.
Authors: Ferrarese R, Harsh G, Yadav A, Bug E, Maticzka D, Reichardt W, Dombrowski S, Miller T, Masilamani A, Dai F, Kim H, Hadler M, Scholtens D, Yu I, Beck J, Srinivasasainagendra V, Costa F, Baxan N, Pfeifer D, von Elverfeldt D, Backofen R, Weyerbrock A, Duarte C, He X, Prinz M, Chandler J, Vogel H, Chakravarti A, Rich J, Carro M, Bredel M
J Clin Invest, 2014-05-27;124(7):2861-76.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Translating dosage compensation to trisomy 21.
Authors: Jiang J, Jing Y, Cost G, Chiang J, Kolpa H, Cotton A, Carone D, Carone B, Shivak D, Guschin D, Pearl J, Rebar E, Byron M, Gregory P, Brown C, Urnov F, Hall L, Lawrence J
Nature, 2013-07-17;500(7462):296-300.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Transcription factor-mediated reprogramming of fibroblasts to expandable, myelinogenic oligodendrocyte progenitor cells.
Authors: Najm, Fadi J, Lager, Angela M, Zaremba, Anita, Wyatt, Krysta, Caprariello, Andrew V, Factor, Daniel C, Karl, Robert T, Maeda, Tadao, Miller, Robert H, Tesar, Paul J
Nat Biotechnol, 2013-04-14;31(5):426-33.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
Derivation and expansion using only small molecules of human neural progenitors for neurodegenerative disease modeling.
Authors: Reinhardt P, Glatza M, Hemmer K, Tsytsyura Y, Thiel C, Hoing S, Moritz S, Parga J, Wagner L, Bruder J, Wu G, Schmid B, Ropke A, Klingauf J, Schwamborn J, Gasser T, Scholer H, Sterneckert J
PLoS ONE, 2013-03-22;8(3):e59252.
Species: Human
Sample Types: Whole Cells
Applications: ICC -
Sonic hedgehog signaling controls thalamic progenitor identity and nuclei specification in mice.
Authors: Vue TY, Bluske K, Alishahi A, Yang LL, Koyano-Nakagawa N, Novitch B, Nakagawa Y
J. Neurosci., 2009-04-08;29(14):4484-97.
Species: Mouse
Sample Types: Whole Cells
Applications: ICC -
An Optimized Workflow to Generate and Characterize iPSC-Derived Motor Neuron (MN) Spheroids
Authors: María José Castellanos-Montiel, Mathilde Chaineau, Anna Kristyna Franco-Flores, Ghazal Haghi, Dulce Carrillo-Valenzuela, Wolfgang E. Reintsch et al.
Cells
-
Biochemical Characteristics of iPSC-Derived Dopaminergic Neurons from N370S GBA Variant Carriers with and without Parkinson’s Disease
Authors: Elena V. Grigor’eva, Alena E. Kopytova, Elena S. Yarkova, Sophia V. Pavlova, Diana A. Sorogina, Anastasia A. Malakhova et al.
International Journal of Molecular Sciences
-
Generation of highly enriched populations of optic vesicle-like retinal cells from human pluripotent stem cells.
Authors: Ohlemacher SK, Iglesias CL, Sridhar A et al.
Curr Protoc Stem Cell Biol
-
Mesendogen, a novel inhibitor of TRPM6, promotes mesoderm and definitive endoderm differentiation of human embryonic stem cells through alteration of magnesium homeostasis
Authors: Yijie Geng, Bradley Feng
Heliyon
-
Murine cerebral organoids develop network of functional neurons and hippocampal brain region identity
Authors: Francesca Ciarpella, Raluca Georgiana Zamfir, Alessandra Campanelli, Elisa Ren, Giulia Pedrotti, Emanuela Bottani et al.
iScience
-
Cell delamination in the mesencephalic neural fold and its implication for the origin of ectomesenchyme
Authors: Raymond Teck Ho Lee, Hiroki Nagai, Yukiko Nakaya, Guojun Sheng, Paul A. Trainor, James A. Weston et al.
Development
-
Neural stem cells for disease modeling of Wolman disease and evaluation of therapeutics
Authors: Francis Aguisanda, Charles D. Yeh, Catherine Z. Chen, Rong Li, Jeanette Beers, Jizhong Zou et al.
Orphanet Journal of Rare Diseases
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A new patient‐derived iPSC model for dystroglycanopathies validates a compound that increases glycosylation of alpha ‐dystroglycan
Authors: Jihee Kim, Beatrice Lana, Silvia Torelli, David Ryan, Francesco Catapano, Pierpaolo Ala et al.
EMBO reports
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High-resolution transcriptional and morphogenetic profiling of cells from micropatterned human ESC gastruloid cultures
Authors: KT Minn, YC Fu, S He, S Dietmann, SC George, MA Anastasio, SA Morris, L Solnica-Kr
Elife, 2020-11-18;9(0):.
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Location of transient ectodermal progenitor potential in mouse development
Authors: Lingyu Li, Chang Liu, Steffen Biechele, Qingqing Zhu, Lu Song, Fredrik Lanner et al.
Development
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Accelerated differentiation of human pluripotent stem cells into neural lineages via an early intermediate ectoderm population
Authors: Patrick Walsh, Vincent Truong, Sushmita Nayak, Marietta Saldías Montivero, Walter C. Low, Ann M. Parr et al.
Stem Cells
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Nervous System Regionalization Entails Axial Allocation before Neural Differentiation
Authors: Vicki Metzis, Sebastian Steinhauser, Edvinas Pakanavicius, Mina Gouti, Despina Stamataki, Kenzo Ivanovitch et al.
Cell
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Rapid and robust generation of functional oligodendrocyte progenitor cells from epiblast stem cells
Authors: Fadi J. Najm, Anita Zaremba, Andrew V. Caprariello, Shreya Nayak, Eric C. Freundt, Peter C. Scacheri et al.
Nature Methods
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Electroacupuncture Promotes the Survival of the Grafted Human MGE Neural Progenitors in Rats with Cerebral Ischemia by Promoting Angiogenesis and Inhibiting Inflammation
Authors: Juan Li, Luting Chen, Danping Li, Min Lu, Xiaolin Huang, Xiaohua Han et al.
Neural Plasticity
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The RNA helicase DDX6 controls early mouse embryogenesis by repressing aberrant inhibition of BMP signaling through miRNA-mediated gene silencing
Authors: Kim J, Muraoka M, Okada H et al.
PLOS Genetics
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Generation of Vascularized Neural Organoids by Co-culturing with Mesodermal Progenitor Cells
Authors: Philipp Wörsdörfer, Anna Rockel, Yvonne Alt, Anna Kern, Süleyman Ergün
STAR Protocols
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Acquisition of neural fate by combination of BMP blockade and chromatin modification
Authors: Agnes Lee Chen Ong, Toshiya Kokaji, Arisa Kishi, Yoshihiro Takihara, Takuma Shinozuka, Ren Shimamoto et al.
iScience
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Process-based expansion and neural differentiation of human pluripotent stem cells for transplantation and disease modeling
Authors: Alexander E. Stover, David J. Brick, Hubert E. Nethercott, Maria G. Banuelos, Lei Sun, Diane K. O'Dowd et al.
Journal of Neuroscience Research
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Prospective separation and transcriptome analyses of cortical projection neurons and interneurons based on lineage tracing by Tbr2 (Eomes)-GFP/Dcx-mRFP reporters.
Authors: Liu J, Wu X et al.
Dev Neurobiol
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The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders
Authors: Cheen Euong Ang, Qing Ma, Orly L Wapinski, ShengHua Fan, Ryan A Flynn, Qian Yi Lee et al.
eLife
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Chemically induced senescence in human stem cell-derived neurons promotes phenotypic presentation of neurodegeneration
Authors: Fathi A, Mathivanan S, Kong L et al.
Aging Cell
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Transformative Network Modeling of Multi-omics Data Reveals Detailed Circuits, Key Regulators, and Potential Therapeutics for Alzheimer’s Disease
Authors: Minghui Wang, Aiqun Li, Michiko Sekiya, Noam D. Beckmann, Xiuming Quan, Nadine Schrode et al.
Neuron
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Characterization of Hypothalamic MCH Neuron Development in a 3D Differentiation System of Mouse Embryonic Stem Cells
Authors: Kodani Y, Kawata M, Suga H et al.
eNeuro
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Neural stem cells derived from H9 cells were fixed in 4% PFA for 15 minutes. The cells were incubated in the sox1 antibody at the concentration of 5ug/ml overnight at 4 degree, the followed with secondary antibody incubation at room temperature for 1hour.
SOX1 was detected human embryonic stem cells-derived neural stem cells using Goat Anti-Human/Mouse/Rat SOX1 Antigen Affinity-purified Polyclonal Antibody (Catalog # AF3369) at 1 µg/mL for overnight at 4°C. Cells were stained using the Donkey anti-Goat IgG (H+L) Cross-Adsorbed, Alexa Fluor® 568 and counterstained with DAPI (blue).
Specificity: Specific
Sensitivity: Sensitive
Buffer: 1% BSA + 0.3% Triton X-100 in PBS
Dilution: 1/100